Can Invisalign aligners cause permanent damage to the cervical and/or thoracic spine?

Since getting a major refinement on my Invisalign aligners, I have started to experience headaches and progressively worsening pain in my right trap and right side of my neck. I am nearing the end of my treatment, and from what I've read here, most orthodontists DON'T think it's due to the Invisaligns.